Tools

ABC: sources codes, executables, scripts and detailed informations associated with the ABC (Approximate Bayesian Analysis) analysis of the study Nabholz et al. 2014, Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (O. glaberrima), Mol Ecol. 2014 Mar 30.

popGenStat : sources codes, executables, scripts and detailed informations associated with the population genetic statistics of the study Nabholz et al. 2014, Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (O. glaberrima), Mol Ecol. 2014 Mar 30.

arcad-hts : a package gathering scripts for the analysis of high-throughput sequencing data from the ARCAD project.

South Green Galaxy : Galaxy is a workflow manager, which permits to run several bioinformatic analyses using a simple web interface. The South Green Galaxy instance is opened to anyone, but anonymous users are limited to 10 Mo data. This instance contains a large collection of exclusive tools of the platform. The access to workflows developed for ARCAD project is currently restricted to users with specific login.