Empogona ruandensis-tricolysia

Organism Details
Common Name Coffee out-group
Genus Empogona
Species ruandensis-tricolysia
Abbreviation E.ruandensis-tricolysia
Coffee is the world's leading agricultural resource in value terms. It is a major source of revenue for more than 40 tropical countries, and generates more than 120 million jobs. Coffee is grown on more than 10 million hectares worldwide, primarily on small family farms (70% of the crop comes from farms of under 5 hectares). Two species, Coffea arabica (65%) and Coffea canephora (35%), are cultivated.

Life span Perennial
Mating system Allogamy
Number of chromosomes
Sequenced accession

Downloads

The following files are available for download:

Empogona ruandensis-tricolysia (GFF3 format) CB1_Empogona.gff
Empogona ruandensis-tricolysia (FASTA format) Abyss_Cap3_CB1_250.fasta


Functional annotations

Blast vs UniProt SwissProt (XML format) CB1_SP.xml
Blast vs UniProt TrEMBLE (XML format) CB1_TR.xml
Blast vs NCBI nr (XML format) CB1_NR.xml
Blast vs nt (XML format) CB1_NT.xml
Blast vs Arabidopsis Thaliana (XML format) CB1_arabido.xml
Blast vs Rice (XML format) CB1_rice.xml
Blast2Go Abyss_Cap3_CB1_250.4b2g.xml.annot
Prot4EST CB1_translations_xtn.fsa
CB1_translations_noxtn.fsa
Feature Browser
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Feature Name Unique Name Type
Contig1084 Contig1084 gene
Contig1085 Contig1085 gene
Contig1086 Contig1086 gene
Contig1088 Contig1088 gene
Contig1092 Contig1092 gene
Contig1093 Contig1093 gene
Contig1094 Contig1094 gene
Contig1095 Contig1095 gene
Contig1096 Contig1096 gene
Contig1097 Contig1097 gene
Resources