Coffea pseudozanguebariae-empogonaour

Organism Details
Common Name Coffee out-group
Genus Coffea
Species pseudozanguebariae-empogonaour
Abbreviation C.pseudozanguebariae-empogonaour
Coffee is the world's leading agricultural resource in value terms. It is a major source of revenue for more than 40 tropical countries, and generates more than 120 million jobs. Coffee is grown on more than 10 million hectares worldwide, primarily on small family farms (70% of the crop comes from farms of under 5 hectares). Two species, Coffea arabica (65%) and Coffea canephora (35%), are cultivated.

Life span Perennial
Mating system Allogamy
Number of chromosomes
Sequenced accession PSE BM 12/8

Downloads

The following files are available for download:

Coffea pseudozanguebariae-empogonaour (GFF3 format) CB4_Pseudozanguebariae.gff
Coffea pseudozanguebariae-empogonaour (FASTA format) Abyss_Cap3_CB4_250.fasta


Functional annotations

Blast vs UniProt SwissProt (XML format) CB4_SP.xml
Blast vs UniProt TrEMBLE (XML format) CB4_TR.xml
Blast vs NCBI nr (XML format) CB4_NR.xml
Blast vs nt (XML format) CB4_NT.xml
Blast vs Arabidopsis Thaliana (XML format) CB4_arabido.xml
Blast vs Rice (XML format) CB4_rice.xml
Blast2Go Abyss_Cap3_CB4_250.4b2g.xml.annot
Prot4EST CB4_translations_xtn.fsa
CB4_translations_noxtn.fsa
Feature Browser
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Feature Name Unique Name Type
Contig1086 Contig1086 gene
Contig1087 Contig1087 gene
Contig1088 Contig1088 gene
Contig1090 Contig1090 gene
Contig1091 Contig1091 gene
Contig1094 Contig1094 gene
Contig1095 Contig1095 gene
Contig1096 Contig1096 gene
Contig1097 Contig1097 gene
Contig1098 Contig1098 gene
Resources